WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17F4.6b.1 Sequence Name  C17F4.6b.1
Length (nt)  3531   Chromosome Location  II: 3251082-3259299
Chromosome . Primary Identifier  II Chromosome Location . Start  3251082
Chromosome Location . End  3259299 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17F4.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001544 gcy-19 C17F4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17F4.6b C17F4.6b 3531   II: 3251082-3251255

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17F4.6b.1 3251082 3259299 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44597   174   II: 3251082-3251255 Caenorhabditis elegans
Exon44600   153   II: 3251413-3251565 Caenorhabditis elegans
Exon44603   98   II: 3251649-3251746 Caenorhabditis elegans
Exon44606   203   II: 3252161-3252363 Caenorhabditis elegans
Exon44609   140   II: 3252423-3252562 Caenorhabditis elegans
Exon44612   124   II: 3252816-3252939 Caenorhabditis elegans
Exon44615   233   II: 3253136-3253368 Caenorhabditis elegans
Exon44618   86   II: 3253417-3253502 Caenorhabditis elegans
Exon44621   373   II: 3253674-3254046 Caenorhabditis elegans
Exon44624   370   II: 3254116-3254485 Caenorhabditis elegans
Exon44627   206   II: 3254937-3255142 Caenorhabditis elegans
Exon44630   128   II: 3255244-3255371 Caenorhabditis elegans
Exon44633   139   II: 3255467-3255605 Caenorhabditis elegans
Exon44636   126   II: 3255666-3255791 Caenorhabditis elegans
Exon44640   89   II: 3256307-3256395 Caenorhabditis elegans
Exon44644   27   II: 3256591-3256617 Caenorhabditis elegans
Exon44646   123   II: 3257052-3257174 Caenorhabditis elegans
Exon44649   236   II: 3257235-3257470 Caenorhabditis elegans
Exon44652   133   II: 3257517-3257649 Caenorhabditis elegans
Exon44655   110   II: 3257695-3257804 Caenorhabditis elegans
Exon44658   131   II: 3258748-3258878 Caenorhabditis elegans
Exon44660   129   II: 3259171-3259299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17F4.6b.1 3251082 3259299 -1

1 Sequence

Length
3531

1 Sequence Ontology Term

Identifier Name Description
transcript