WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D4.1b.2 Sequence Name  T06D4.1b.2
Length (nt)  1758   Chromosome Location  II: 3381830-3384015
Chromosome . Primary Identifier  II Chromosome Location . Start  3381830
Chromosome Location . End  3384015 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D4.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020290 T06D4.1 T06D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D4.1b T06D4.1b 963   II: 3382485-3382577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.1b.2 3381830 3384015 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44943   99   II: 3381830-3381928 Caenorhabditis elegans
Exon44950   261   II: 3381974-3382234 Caenorhabditis elegans
Exon44955   300   II: 3382278-3382577 Caenorhabditis elegans
Exon44962   78   II: 3382626-3382703 Caenorhabditis elegans
Exon44968   78   II: 3382752-3382829 Caenorhabditis elegans
Exon44974   96   II: 3382879-3382974 Caenorhabditis elegans
Exon44980   219   II: 3383024-3383242 Caenorhabditis elegans
Exon44986   96   II: 3383290-3383385 Caenorhabditis elegans
Exon44992   207   II: 3383435-3383641 Caenorhabditis elegans
Exon44998   324   II: 3383692-3384015 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.1b.2 3381830 3384015 1

1 Sequence

Length
1758

1 Sequence Ontology Term

Identifier Name Description
transcript