WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D4.1b.3 Sequence Name  T06D4.1b.3
Length (nt)  1704   Chromosome Location  II: 3381830-3384013
Chromosome . Primary Identifier  II Chromosome Location . Start  3381830
Chromosome Location . End  3384013 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D4.1b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020290 T06D4.1 T06D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D4.1b T06D4.1b 963   II: 3382485-3382577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.1b.3 3381830 3384013 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44944   99   II: 3381830-3381928 Caenorhabditis elegans
Exon44951   261   II: 3381974-3382234 Caenorhabditis elegans
Exon44953   146   II: 3382278-3382423 Caenorhabditis elegans
Exon44958   102   II: 3382476-3382577 Caenorhabditis elegans
Exon44963   78   II: 3382626-3382703 Caenorhabditis elegans
Exon44969   78   II: 3382752-3382829 Caenorhabditis elegans
Exon44975   96   II: 3382879-3382974 Caenorhabditis elegans
Exon44981   219   II: 3383024-3383242 Caenorhabditis elegans
Exon44987   96   II: 3383290-3383385 Caenorhabditis elegans
Exon44993   207   II: 3383435-3383641 Caenorhabditis elegans
Exon44997   322   II: 3383692-3384013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.1b.3 3381830 3384013 1

1 Sequence

Length
1704

1 Sequence Ontology Term

Identifier Name Description
transcript