WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D4.1b.4 Sequence Name  T06D4.1b.4
Length (nt)  1802   Chromosome Location  II: 3381834-3384020
Chromosome . Primary Identifier  II Chromosome Location . Start  3381834
Chromosome Location . End  3384020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D4.1b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020290 T06D4.1 T06D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D4.1b T06D4.1b 963   II: 3382485-3382577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.1b.4 3381834 3384020 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44945   95   II: 3381834-3381928 Caenorhabditis elegans
Exon44952   604   II: 3381974-3382577 Caenorhabditis elegans
Exon44964   78   II: 3382626-3382703 Caenorhabditis elegans
Exon44970   78   II: 3382752-3382829 Caenorhabditis elegans
Exon44976   96   II: 3382879-3382974 Caenorhabditis elegans
Exon44982   219   II: 3383024-3383242 Caenorhabditis elegans
Exon44988   96   II: 3383290-3383385 Caenorhabditis elegans
Exon44994   207   II: 3383435-3383641 Caenorhabditis elegans
Exon45000   329   II: 3383692-3384020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.1b.4 3381834 3384020 1

1 Sequence

Length
1802

1 Sequence Ontology Term

Identifier Name Description
transcript