WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F18A12.5 Sequence Name  F18A12.5
Length (nt)  2103   Chromosome Location  II: 3395844-3396017
Chromosome . Primary Identifier  II Chromosome Location . Start  3395844
Chromosome Location . End  3396017
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A12.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35493 NEP-9 81.4 700 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00044926
WBRNAi00013494
WBRNAi00018289
WBRNAi00031094
WBRNAi00089043

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F18A12.5 3395844 3396017 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017554 nep-9 F18A12.5 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F18A12.5 3395844 3396017 -1
CDS:F18A12.5 3396065 3396238 -1
CDS:F18A12.5 3396284 3396534 -1
CDS:F18A12.5 3396594 3396750 -1
CDS:F18A12.5 3396807 3396916 -1
CDS:F18A12.5 3396964 3397114 -1
CDS:F18A12.5 3397612 3397725 -1
CDS:F18A12.5 3397772 3397954 -1
CDS:F18A12.5 3398000 3398101 -1
CDS:F18A12.5 3398144 3398280 -1
CDS:F18A12.5 3398510 3398606 -1
CDS:F18A12.5 3398653 3398741 -1
CDS:F18A12.5 3398797 3398932 -1
CDS:F18A12.5 3398986 3399180 -1
CDS:F18A12.5 3399229 3399261 -1

1 Sequence

Length
2103

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18A12.5.1 F18A12.5.1 2207   II: 3395791-3399312