WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49F6A.3 Sequence Name  Y49F6A.3
Length (nt)  963   Chromosome Location  II: 3592051-3592166
Chromosome . Primary Identifier  II Chromosome Location . Start  3592051
Chromosome Location . End  3592166
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49F6A.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24393 SRH-57 36.6 320 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057030
WBRNAi00057031
WBRNAi00020786
WBRNAi00020787

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49F6A.3 3592051 3592166 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005509 srh-305 Y49F6A.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49F6A.3 3592051 3592166 -1
CDS:Y49F6A.3 3592340 3592418 -1
CDS:Y49F6A.3 3592525 3592755 -1
CDS:Y49F6A.3 3592910 3593100 -1
CDS:Y49F6A.3 3593144 3593489 -1

1 Sequence

Length
963

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49F6A.3.1 Y49F6A.3.1 963   II: 3592051-3593489