WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49D10.10 Sequence Name  C49D10.10
Length (nt)  1905   Chromosome Location  II: 3873541-3873714
Chromosome . Primary Identifier  II Chromosome Location . Start  3873541
Chromosome Location . End  3873714
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49D10.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45849 NEP-3 72.8 634 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042797
WBRNAi00012138
WBRNAi00024867
WBRNAi00024868
WBRNAi00027233
WBRNAi00089012

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49D10.10 3873541 3873714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016778 nep-3 C49D10.10 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49D10.10 3873541 3873714 -1
CDS:C49D10.10 3873764 3873922 -1
CDS:C49D10.10 3874594 3874844 -1
CDS:C49D10.10 3874892 3875051 -1
CDS:C49D10.10 3875098 3875352 -1
CDS:C49D10.10 3875398 3875514 -1
CDS:C49D10.10 3876078 3876179 -1
CDS:C49D10.10 3876237 3876364 -1
CDS:C49D10.10 3876415 3876523 -1
CDS:C49D10.10 3876593 3876684 -1
CDS:C49D10.10 3876729 3876864 -1
CDS:C49D10.10 3876916 3877137 -1

1 Sequence

Length
1905

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49D10.10.1 C49D10.10.1 1979   II: 3873511-3877227