WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53C3.2.1 Sequence Name  F53C3.2.1
Length (nt)  1239   Chromosome Location  II: 3907140-3908516
Chromosome . Primary Identifier  II Chromosome Location . Start  3907140
Chromosome Location . End  3908516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53C3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018746 fbxb-103 F53C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53C3.2 F53C3.2 975   II: 3907167-3907246

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53C3.2.1 3907140 3908516 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46421   107   II: 3907140-3907246 Caenorhabditis elegans
Exon46422   1132   II: 3907385-3908516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53C3.2.1 3907140 3908516 1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript