WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53C3.13d Sequence Name  F53C3.13d
Length (nt)  1119   Chromosome Location  II: 3922994-3923156
Chromosome . Primary Identifier  II Chromosome Location . Start  3922994
Chromosome Location . End  3923156
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53C3.13d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52052 PLPP-1.1, isoform d 42.1 372 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00007287
WBRNAi00048110
WBRNAi00015498
WBRNAi00076464
WBRNAi00032687
WBRNAi00110639

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53C3.13d 3922994 3923156 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018756 plpp-1.1 F53C3.13 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53C3.13d 3922994 3923156 -1
CDS:F53C3.13d 3924461 3924568 -1
CDS:F53C3.13d 3925520 3926079 -1
CDS:F53C3.13d 3926917 3927137 -1
CDS:F53C3.13d 3927842 3927908 -1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53C3.13d.2 F53C3.13d.2 2600   II: 3921594-3927989
Transcript:F53C3.13d.1 F53C3.13d.1 1575   II: 3921717-3927982