WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10G6.3i.1 Sequence Name  K10G6.3i.1
Length (nt)  5978   Chromosome Location  II: 3950377-3972050
Chromosome . Primary Identifier  II Chromosome Location . Start  3950377
Chromosome Location . End  3972050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10G6.3i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.3i K10G6.3i 5472   II: 3950377-3950396

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3i.1 3950377 3972050 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46456   20   II: 3950377-3950396 Caenorhabditis elegans
Exon46460   75   II: 3951259-3951333 Caenorhabditis elegans
Exon46465   172   II: 3961689-3961860 Caenorhabditis elegans
Exon46469   143   II: 3962202-3962344 Caenorhabditis elegans
Exon46480   450   II: 3962404-3962853 Caenorhabditis elegans
Exon46492   1095   II: 3964186-3965280 Caenorhabditis elegans
Exon46509   102   II: 3965453-3965554 Caenorhabditis elegans
Exon46533   2832   II: 3966386-3969217 Caenorhabditis elegans
Exon46556   163   II: 3969301-3969463 Caenorhabditis elegans
Exon46574   92   II: 3970029-3970120 Caenorhabditis elegans
Exon46586   203   II: 3970537-3970739 Caenorhabditis elegans
Exon46599   89   II: 3970901-3970989 Caenorhabditis elegans
Exon46614   542   II: 3971509-3972050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3i.1 3950377 3972050 1

1 Sequence

Length
5978

1 Sequence Ontology Term

Identifier Name Description
transcript