WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10G6.3b.1 Sequence Name  K10G6.3b.1
Length (nt)  5166   Chromosome Location  II: 3962223-3971544
Chromosome . Primary Identifier  II Chromosome Location . Start  3962223
Chromosome Location . End  3971544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10G6.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.3b K10G6.3b 5166   II: 3962223-3962344

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3b.1 3962223 3971544 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46471   122   II: 3962223-3962344 Caenorhabditis elegans
Exon46475   450   II: 3962404-3962853 Caenorhabditis elegans
Exon46487   1095   II: 3964186-3965280 Caenorhabditis elegans
Exon46503   102   II: 3965453-3965554 Caenorhabditis elegans
Exon46527   2832   II: 3966386-3969217 Caenorhabditis elegans
Exon46553   145   II: 3969301-3969445 Caenorhabditis elegans
Exon46570   92   II: 3970029-3970120 Caenorhabditis elegans
Exon46582   203   II: 3970537-3970739 Caenorhabditis elegans
Exon46595   89   II: 3970901-3970989 Caenorhabditis elegans
Exon46606   36   II: 3971509-3971544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3b.1 3962223 3971544 1

1 Sequence

Length
5166

1 Sequence Ontology Term

Identifier Name Description
transcript