WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10G6.3a.1 Sequence Name  K10G6.3a.1
Length (nt)  6212   Chromosome Location  II: 3962223-3972137
Chromosome . Primary Identifier  II Chromosome Location . Start  3962223
Chromosome Location . End  3972137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10G6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.3a K10G6.3a 5619   II: 3962223-3962344

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3a.1 3962223 3972137 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46472   122   II: 3962223-3962344 Caenorhabditis elegans
Exon46474   450   II: 3962404-3962853 Caenorhabditis elegans
Exon46486   1095   II: 3964186-3965280 Caenorhabditis elegans
Exon46502   102   II: 3965453-3965554 Caenorhabditis elegans
Exon46518   435   II: 3965652-3966086 Caenorhabditis elegans
Exon46526   2832   II: 3966386-3969217 Caenorhabditis elegans
Exon46554   163   II: 3969301-3969463 Caenorhabditis elegans
Exon46569   92   II: 3970029-3970120 Caenorhabditis elegans
Exon46581   203   II: 3970537-3970739 Caenorhabditis elegans
Exon46594   89   II: 3970901-3970989 Caenorhabditis elegans
Exon46615   629   II: 3971509-3972137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3a.1 3962223 3972137 1

1 Sequence

Length
6212

1 Sequence Ontology Term

Identifier Name Description
transcript