WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10G6.3n.1 Sequence Name  K10G6.3n.1
Length (nt)  5379   Chromosome Location  II: 3962522-3971544
Chromosome . Primary Identifier  II Chromosome Location . Start  3962522
Chromosome Location . End  3971544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10G6.3n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.3n K10G6.3n 5379   II: 3962522-3962853

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3n.1 3962522 3971544 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46484   332   II: 3962522-3962853 Caenorhabditis elegans
Exon46496   1095   II: 3964186-3965280 Caenorhabditis elegans
Exon46514   102   II: 3965453-3965554 Caenorhabditis elegans
Exon46524   435   II: 3965652-3966086 Caenorhabditis elegans
Exon46538   2832   II: 3966386-3969217 Caenorhabditis elegans
Exon46557   163   II: 3969301-3969463 Caenorhabditis elegans
Exon46575   92   II: 3970029-3970120 Caenorhabditis elegans
Exon46587   203   II: 3970537-3970739 Caenorhabditis elegans
Exon46600   89   II: 3970901-3970989 Caenorhabditis elegans
Exon46607   36   II: 3971509-3971544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3n.1 3962522 3971544 1

1 Sequence

Length
5379

1 Sequence Ontology Term

Identifier Name Description
transcript