WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10G6.3c.1 Sequence Name  K10G6.3c.1
Length (nt)  6174   Chromosome Location  II: 3962223-3972140
Chromosome . Primary Identifier  II Chromosome Location . Start  3962223
Chromosome Location . End  3972140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10G6.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.3c K10G6.3c 5190   II: 3962223-3962344

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3c.1 3962223 3972140 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46510   122   II: 3962223-3962344 Caenorhabditis elegans
Exon46513   450   II: 3962404-3962853 Caenorhabditis elegans
Exon46525   1095   II: 3964186-3965280 Caenorhabditis elegans
Exon46541   102   II: 3965453-3965554 Caenorhabditis elegans
Exon46556   435   II: 3965652-3966086 Caenorhabditis elegans
Exon46565   2832   II: 3966386-3969217 Caenorhabditis elegans
Exon46581   122   II: 3969301-3969422 Caenorhabditis elegans
Exon46608   92   II: 3970029-3970120 Caenorhabditis elegans
Exon46620   203   II: 3970537-3970739 Caenorhabditis elegans
Exon46633   89   II: 3970901-3970989 Caenorhabditis elegans
Exon46654   632   II: 3971509-3972140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.3c.1 3962223 3972140 1

1 Sequence

Length
6174

1 Sequence Ontology Term

Identifier Name Description
transcript