WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10G6.4.1 Sequence Name  K10G6.4.1
Length (nt)  1564   Chromosome Location  II: 3972742-3975065
Chromosome . Primary Identifier  II Chromosome Location . Start  3972742
Chromosome Location . End  3975065 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10G6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019641 cank-26 K10G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10G6.4 K10G6.4 1380   II: 3972829-3972960

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.4.1 3972742 3975065 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46657   219   II: 3972742-3972960 Caenorhabditis elegans
Exon46658   70   II: 3973035-3973104 Caenorhabditis elegans
Exon46659   217   II: 3973155-3973371 Caenorhabditis elegans
Exon46660   230   II: 3973661-3973890 Caenorhabditis elegans
Exon46661   189   II: 3973940-3974128 Caenorhabditis elegans
Exon46662   218   II: 3974194-3974411 Caenorhabditis elegans
Exon46663   60   II: 3974458-3974517 Caenorhabditis elegans
Exon46664   207   II: 3974573-3974779 Caenorhabditis elegans
Exon46665   154   II: 3974912-3975065 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10G6.4.1 3972742 3975065 -1

1 Sequence

Length
1564

1 Sequence Ontology Term

Identifier Name Description
transcript