WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07D4.7c Sequence Name  K07D4.7c
Length (nt)  3060   Chromosome Location  II: 4007908-4008678
Chromosome . Primary Identifier  II Chromosome Location . Start  4007908
Chromosome Location . End  4008678
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07D4.7c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51778 EPHX-1, isoform c 115.7 1019 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00050160
WBRNAi00034073
WBRNAi00016724
WBRNAi00070658
WBRNAi00070659

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:K07D4.7c 4007908 4008678 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019487 ephx-1 K07D4.7 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:K07D4.7c 4007908 4008678 1
CDS:K07D4.7c 4008762 4008860 1
CDS:K07D4.7c 4009644 4009737 1
CDS:K07D4.7c 4010996 4011073 1
CDS:K07D4.7c 4012450 4013218 1
CDS:K07D4.7c 4013580 4014432 1
CDS:K07D4.7c 4014942 4015083 1
CDS:K07D4.7c 4015250 4015374 1
CDS:K07D4.7c 4015641 4015769 1

1 Sequence

Length
3060

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07D4.7c.1 K07D4.7c.1 3060   II: 4007908-4015769