WormMine: Gene WBGene00219744

• WormBase Gene ID: WBGene00219744
• Gene Name: anr-41
• Sequence Name: W06A11.5
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by dpy-21 and ogt-1 based on RNA-seq studies.
• Biotype: SO:0002182
• Genetic Position: II :-5.66545±
• Length (nt): 472

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219744

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:W06A11.5	W06A11.5	472	II: 4059052-4059523

Other

0 CDSs

2 RNAi Result

• WBRNAi00054855
• WBRNAi00036319

17 Allele

• gk963801
• gk963053
• WBVar02122917
• gk499307
• gk615375
• gk609546
• gk815302
• WBVar02123662
• WBVar02121135
• WBVar01304891
• WBVar00170798
• WBVar02122101
• WBVar02122358
• WBVar02120793
• WBVar02121851
• gk963088
• WBVar02121377

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219744
• Start: 4059052
• End: 4059523
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts that showed signifcantly increased expression in pabp-2(RNAi) animals comparing to in N2 animals injected with empty vector at L1 larva stage and collected at L4 larva stage.	FDR < 0.05, fold change > 2	WBPaper00067368:pabp-2(RNAi)_upregulated_N2
	Transcripts that showed significantly increased expression in 10-days post L4 adult hermaphrodite N2 grown at 20C, comparing to in 1-day post L4 adult hermaphrodite N2 animals grown at 20C.	CuffDiff, fold change > 2.	WBPaper00065096:Day10_vs_Day1_upregulated
	Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_upregulated
Bacteria: B.subtilis	Transcripts that showed significantly increased expression when animals were fed by probiotic bacteria strain B.subtilis PXN21 comparing to animals fed with OP50 from L1 till day 1 adult.	edgeR 3.16.5, FDR < 0.05, fold change > 2.	WBPaper00059117:B.subtilis_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219744
• Start: 4059052
• End: 4059523
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 472

1 Sequence Ontology Term