WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F31D5.5 Sequence Name  F31D5.5
Length (nt)  5274   Chromosome Location  II: 4195030-4195236
Chromosome . Primary Identifier  II Chromosome Location . Start  4195030
Chromosome Location . End  4195236
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31D5.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53944 MTH-1 194.9 1757 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00046013
WBRNAi00046014
WBRNAi00014149

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F31D5.5 4195030 4195236 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017948 mth-1 F31D5.5 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:F31D5.5 4195030 4195236 -1
CDS:F31D5.5 4195514 4195919 -1
CDS:F31D5.5 4195973 4196188 -1
CDS:F31D5.5 4196399 4196670 -1
CDS:F31D5.5 4196724 4196896 -1
CDS:F31D5.5 4196949 4197267 -1
CDS:F31D5.5 4197477 4197668 -1
CDS:F31D5.5 4197714 4197860 -1
CDS:F31D5.5 4197906 4198023 -1
CDS:F31D5.5 4198076 4198339 -1
CDS:F31D5.5 4198449 4198790 -1
CDS:F31D5.5 4198926 4199453 -1
CDS:F31D5.5 4199590 4199829 -1
CDS:F31D5.5 4199880 4200125 -1
CDS:F31D5.5 4200457 4200726 -1
CDS:F31D5.5 4200776 4201051 -1
CDS:F31D5.5 4201296 4201574 -1
CDS:F31D5.5 4201628 4201903 -1
CDS:F31D5.5 4202175 4202450 -1
CDS:F31D5.5 4203525 4203751 -1

1 Sequence

Length
5274

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F31D5.5.1 F31D5.5.1 5506   II: 4194826-4203779