WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31D5.4.1 Sequence Name  F31D5.4.1
Length (nt)  3101   Chromosome Location  II: 4188976-4194314
Chromosome . Primary Identifier  II Chromosome Location . Start  4188976
Chromosome Location . End  4194314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31D5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017947 mth-2 F31D5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31D5.4 F31D5.4 2916   II: 4189036-4189362

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31D5.4.1 4188976 4194314 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47024   387   II: 4188976-4189362 Caenorhabditis elegans
Exon47025   203   II: 4189410-4189612 Caenorhabditis elegans
Exon47026   119   II: 4189665-4189783 Caenorhabditis elegans
Exon47027   195   II: 4189906-4190100 Caenorhabditis elegans
Exon47028   119   II: 4190156-4190274 Caenorhabditis elegans
Exon47029   302   II: 4190328-4190629 Caenorhabditis elegans
Exon47030   189   II: 4190827-4191015 Caenorhabditis elegans
Exon47031   233   II: 4191111-4191343 Caenorhabditis elegans
Exon47032   86   II: 4191391-4191476 Caenorhabditis elegans
Exon47033   147   II: 4191676-4191822 Caenorhabditis elegans
Exon47034   124   II: 4191990-4192113 Caenorhabditis elegans
Exon47036   360   II: 4192167-4192526 Caenorhabditis elegans
Exon47037   200   II: 4192887-4193086 Caenorhabditis elegans
Exon47038   82   II: 4193259-4193340 Caenorhabditis elegans
Exon47039   355   II: 4193960-4194314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31D5.4.1 4188976 4194314 -1

1 Sequence

Length
3101

1 Sequence Ontology Term

Identifier Name Description
transcript