WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK430.5.1 Sequence Name  ZK430.5.1
Length (nt)  3901   Chromosome Location  II: 4405658-4416553
Chromosome . Primary Identifier  II Chromosome Location . Start  4405658
Chromosome Location . End  4416553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK430.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022741 ZK430.5 ZK430.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK430.5 ZK430.5 3795   II: 4405954-4405997

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK430.5.1 4405658 4416553 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47603   60   II: 4405658-4405717 Caenorhabditis elegans
Exon47604   90   II: 4405908-4405997 Caenorhabditis elegans
Exon47605   715   II: 4407492-4408206 Caenorhabditis elegans
Exon47606   163   II: 4408268-4408430 Caenorhabditis elegans
Exon47607   409   II: 4409285-4409693 Caenorhabditis elegans
Exon47608   232   II: 4410401-4410632 Caenorhabditis elegans
Exon47609   123   II: 4412476-4412598 Caenorhabditis elegans
Exon47610   299   II: 4412645-4412943 Caenorhabditis elegans
Exon47611   898   II: 4412990-4413887 Caenorhabditis elegans
Exon47612   179   II: 4413936-4414114 Caenorhabditis elegans
Exon47613   96   II: 4414592-4414687 Caenorhabditis elegans
Exon47614   107   II: 4414736-4414842 Caenorhabditis elegans
Exon47615   177   II: 4415966-4416142 Caenorhabditis elegans
Exon47616   353   II: 4416201-4416553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK430.5.1 4405658 4416553 1

1 Sequence

Length
3901

1 Sequence Ontology Term

Identifier Name Description
transcript