WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06B4.3.1 Sequence Name  W06B4.3.1
Length (nt)  3247   Chromosome Location  II: 4461130-4467896
Chromosome . Primary Identifier  II Chromosome Location . Start  4461130
Chromosome Location . End  4467896 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021058 vps-18 W06B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06B4.3 W06B4.3 3081   II: 4461131-4461204

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06B4.3.1 4461130 4467896 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47843   75   II: 4461130-4461204 Caenorhabditis elegans
Exon47844   116   II: 4461248-4461363 Caenorhabditis elegans
Exon47845   781   II: 4461428-4462208 Caenorhabditis elegans
Exon47846   387   II: 4462837-4463223 Caenorhabditis elegans
Exon47847   682   II: 4464024-4464705 Caenorhabditis elegans
Exon47848   394   II: 4465551-4465944 Caenorhabditis elegans
Exon47849   580   II: 4466824-4467403 Caenorhabditis elegans
Exon47850   232   II: 4467665-4467896 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06B4.3.1 4461130 4467896 1

1 Sequence

Length
3247

1 Sequence Ontology Term

Identifier Name Description
transcript