WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0304.3.1 Sequence Name  B0304.3.1
Length (nt)  1719   Chromosome Location  II: 4512211-4516133
Chromosome . Primary Identifier  II Chromosome Location . Start  4512211
Chromosome Location . End  4516133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0304.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015135 cyp-23A1 B0304.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0304.3 B0304.3 1605   II: 4512226-4512318

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0304.3.1 4512211 4516133 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47919   108   II: 4512211-4512318 Caenorhabditis elegans
Exon47920   130   II: 4512655-4512784 Caenorhabditis elegans
Exon47921   89   II: 4512920-4513008 Caenorhabditis elegans
Exon47922   94   II: 4513174-4513267 Caenorhabditis elegans
Exon47923   125   II: 4513431-4513555 Caenorhabditis elegans
Exon47924   437   II: 4513997-4514433 Caenorhabditis elegans
Exon47926   547   II: 4514976-4515522 Caenorhabditis elegans
Exon47927   189   II: 4515945-4516133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0304.3.1 4512211 4516133 1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
transcript