WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D11.11d.1 Sequence Name  F35D11.11d.1
Length (nt)  4728   Chromosome Location  II: 4627994-4634566
Chromosome . Primary Identifier  II Chromosome Location . Start  4627994
Chromosome Location . End  4634566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D11.11d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018051 che-10 F35D11.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D11.11d F35D11.11d 4728   II: 4627994-4628049

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35D11.11d.1 4627994 4634566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48172   56   II: 4627994-4628049 Caenorhabditis elegans
Exon48174   163   II: 4628142-4628304 Caenorhabditis elegans
Exon48178   180   II: 4629439-4629618 Caenorhabditis elegans
Exon48182   246   II: 4629797-4630042 Caenorhabditis elegans
Exon48186   944   II: 4630103-4631046 Caenorhabditis elegans
Exon48190   360   II: 4631095-4631454 Caenorhabditis elegans
Exon48194   134   II: 4631501-4631634 Caenorhabditis elegans
Exon48198   215   II: 4631827-4632041 Caenorhabditis elegans
Exon48202   792   II: 4632089-4632880 Caenorhabditis elegans
Exon48203   1638   II: 4632929-4634566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35D11.11d.1 4627994 4634566 -1

1 Sequence

Length
4728

1 Sequence Ontology Term

Identifier Name Description
transcript