WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G7.5a.1 Sequence Name  F10G7.5a.1
Length (nt)  1508   Chromosome Location  II: 4693542-4696408
Chromosome . Primary Identifier  II Chromosome Location . Start  4693542
Chromosome Location . End  4696408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017369 F10G7.5 F10G7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.5a F10G7.5a 1374   II: 4693549-4693660

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.5a.1 4693542 4696408 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48327   119   II: 4693542-4693660 Caenorhabditis elegans
Exon48328   93   II: 4694154-4694246 Caenorhabditis elegans
Exon48330   91   II: 4694296-4694386 Caenorhabditis elegans
Exon48332   127   II: 4694457-4694583 Caenorhabditis elegans
Exon48334   326   II: 4694690-4695015 Caenorhabditis elegans
Exon48336   190   II: 4695068-4695257 Caenorhabditis elegans
Exon48338   108   II: 4695467-4695574 Caenorhabditis elegans
Exon48340   117   II: 4695621-4695737 Caenorhabditis elegans
Exon48343   337   II: 4696072-4696408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.5a.1 4693542 4696408 1

1 Sequence

Length
1508

1 Sequence Ontology Term

Identifier Name Description
transcript