WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33F10.5d.1 Sequence Name  C33F10.5d.1
Length (nt)  3716   Chromosome Location  II: 4798151-4812086
Chromosome . Primary Identifier  II Chromosome Location . Start  4798151
Chromosome Location . End  4812086 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33F10.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016354 rig-6 C33F10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33F10.5d C33F10.5d 3591   II: 4798276-4798563

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33F10.5d.1 4798151 4812086 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48560   413   II: 4798151-4798563 Caenorhabditis elegans
Exon48564   84   II: 4798613-4798696 Caenorhabditis elegans
Exon48567   341   II: 4798749-4799089 Caenorhabditis elegans
Exon48570   138   II: 4799276-4799413 Caenorhabditis elegans
Exon48573   424   II: 4799463-4799886 Caenorhabditis elegans
Exon48576   1001   II: 4799934-4800934 Caenorhabditis elegans
Exon48579   185   II: 4800985-4801169 Caenorhabditis elegans
Exon48581   192   II: 4801220-4801411 Caenorhabditis elegans
Exon48583   127   II: 4801651-4801777 Caenorhabditis elegans
Exon48587   247   II: 4808288-4808534 Caenorhabditis elegans
Exon48588   238   II: 4808963-4809200 Caenorhabditis elegans
Exon48589   262   II: 4809252-4809513 Caenorhabditis elegans
Exon48597   64   II: 4812023-4812086 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33F10.5d.1 4798151 4812086 -1

1 Sequence

Length
3716

1 Sequence Ontology Term

Identifier Name Description
transcript