WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C33F10.5d Sequence Name  C33F10.5d
Length (nt)  3591   Chromosome Location  II: 4798276-4798563
Chromosome . Primary Identifier  II Chromosome Location . Start  4798276
Chromosome Location . End  4798563
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33F10.5d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37327 RIG-6, isoform d 132.8 1196 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00111604
WBRNAi00111603
WBRNAi00041778
WBRNAi00041779
WBRNAi00002147
WBRNAi00011545
WBRNAi00011546
WBRNAi00093006
WBRNAi00111602
WBRNAi00085674
WBRNAi00111601

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C33F10.5d 4798276 4798563 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016354 rig-6 C33F10.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C33F10.5d 4798276 4798563 -1
CDS:C33F10.5d 4798613 4798696 -1
CDS:C33F10.5d 4798749 4799089 -1
CDS:C33F10.5d 4799276 4799413 -1
CDS:C33F10.5d 4799463 4799886 -1
CDS:C33F10.5d 4799934 4800934 -1
CDS:C33F10.5d 4800985 4801169 -1
CDS:C33F10.5d 4801220 4801411 -1
CDS:C33F10.5d 4801651 4801777 -1
CDS:C33F10.5d 4808288 4808534 -1
CDS:C33F10.5d 4808963 4809200 -1
CDS:C33F10.5d 4809252 4809513 -1
CDS:C33F10.5d 4812023 4812086 -1

1 Sequence

Length
3591

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C33F10.5d.1 C33F10.5d.1 3716   II: 4798151-4812086