WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38A8.3b Sequence Name  Y38A8.3b
Length (nt)  2136   Chromosome Location  II: 4956006-4956392
Chromosome . Primary Identifier  II Chromosome Location . Start  4956006
Chromosome Location . End  4956392
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A8.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51197 ULP-2, isoform b 81.9 711 Caenorhabditis elegans
 

Other

36 RNAi

WormBase ID
WBRNAi00103827
WBRNAi00103835
WBRNAi00055978
WBRNAi00074959
WBRNAi00074961
WBRNAi00074964
WBRNAi00072722
WBRNAi00020250
WBRNAi00074960
WBRNAi00103829
WBRNAi00103846
WBRNAi00103845
WBRNAi00103853
WBRNAi00103851
WBRNAi00103837
WBRNAi00036824
WBRNAi00103823
WBRNAi00103830
WBRNAi00074963
WBRNAi00062060
WBRNAi00103832
WBRNAi00103840
WBRNAi00103836
WBRNAi00026652
WBRNAi00027516
WBRNAi00074958
WBRNAi00074962
WBRNAi00072723
WBRNAi00103842
WBRNAi00103834

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38A8.3b 4956006 4956392 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006737 ulp-2 Y38A8.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38A8.3b 4956006 4956392 -1
CDS:Y38A8.3b 4956443 4957013 -1
CDS:Y38A8.3b 4957065 4957167 -1
CDS:Y38A8.3b 4957439 4957559 -1
CDS:Y38A8.3b 4957606 4957671 -1
CDS:Y38A8.3b 4958637 4958661 -1
CDS:Y38A8.3b 4958712 4958802 -1
CDS:Y38A8.3b 4958850 4959075 -1
CDS:Y38A8.3b 4959126 4959398 -1
CDS:Y38A8.3b 4959447 4959545 -1
CDS:Y38A8.3b 4959596 4959679 -1
CDS:Y38A8.3b 4959728 4959817 -1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38A8.3b.1 Y38A8.3b.1 2751   II: 4955450-4959876