WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04G6.1c Sequence Name  C04G6.1c
Length (nt)  1713   Chromosome Location  II: 5104646-5104771
Chromosome . Primary Identifier  II Chromosome Location . Start  5104646
Chromosome Location . End  5104771
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G6.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36972 MPK-2, isoform c 65.1 570 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00113186
WBRNAi00039667
WBRNAi00010153
WBRNAi00076078
WBRNAi00028462
WBRNAi00112956
WBRNAi00113100
WBRNAi00113154
WBRNAi00087945

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04G6.1c 5104646 5104771 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003402 mpk-2 C04G6.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04G6.1c 5104646 5104771 1
CDS:C04G6.1c 5104828 5105109 1
CDS:C04G6.1c 5105411 5105569 1
CDS:C04G6.1c 5105617 5105684 1
CDS:C04G6.1c 5106095 5106347 1
CDS:C04G6.1c 5106397 5106503 1
CDS:C04G6.1c 5106812 5106925 1
CDS:C04G6.1c 5107616 5107740 1
CDS:C04G6.1c 5107789 5108032 1
CDS:C04G6.1c 5108527 5108656 1
CDS:C04G6.1c 5108705 5108809 1

1 Sequence

Length
1713

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04G6.1c.1 C04G6.1c.1 1963   II: 5104118-5108899
Transcript:C04G6.1c.2 C04G6.1c.2 1799   II: 5104634-5108883