WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A6.11.1 Sequence Name  F58A6.11.1
Length (nt)  1038   Chromosome Location  II: 5155436-5157625
Chromosome . Primary Identifier  II Chromosome Location . Start  5155436
Chromosome Location . End  5157625 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A6.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019028 srb-13 F58A6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A6.11 F58A6.11 1038   II: 5155436-5155823

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.11.1 5155436 5157625 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49467   388   II: 5155436-5155823 Caenorhabditis elegans
Exon49468   197   II: 5155876-5156072 Caenorhabditis elegans
Exon49469   219   II: 5156127-5156345 Caenorhabditis elegans
Exon49471   234   II: 5157392-5157625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.11.1 5155436 5157625 -1

1 Sequence

Length
1038

1 Sequence Ontology Term

Identifier Name Description
transcript