WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27D6.1.1 Sequence Name  C27D6.1.1
Length (nt)  2097   Chromosome Location  II: 5172751-5177440
Chromosome . Primary Identifier  II Chromosome Location . Start  5172751
Chromosome Location . End  5177440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27D6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016160 C27D6.1 C27D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27D6.1 C27D6.1 1938   II: 5172751-5172805

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27D6.1.1 5172751 5177440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49503   55   II: 5172751-5172805 Caenorhabditis elegans
Exon49504   98   II: 5172850-5172947 Caenorhabditis elegans
Exon49505   81   II: 5172997-5173077 Caenorhabditis elegans
Exon49506   504   II: 5173126-5173629 Caenorhabditis elegans
Exon49512   105   II: 5175670-5175774 Caenorhabditis elegans
Exon49513   531   II: 5175829-5176359 Caenorhabditis elegans
Exon49514   120   II: 5176406-5176525 Caenorhabditis elegans
Exon49515   123   II: 5176580-5176702 Caenorhabditis elegans
Exon49516   114   II: 5176746-5176859 Caenorhabditis elegans
Exon49517   366   II: 5177075-5177440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27D6.1.1 5172751 5177440 1

1 Sequence

Length
2097

1 Sequence Ontology Term

Identifier Name Description
transcript