WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F11.9a.1 Sequence Name  C34F11.9a.1
Length (nt)  2421   Chromosome Location  II: 5215122-5225377
Chromosome . Primary Identifier  II Chromosome Location . Start  5215122
Chromosome Location . End  5225377 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F11.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001101 dsh-1 C34F11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F11.9a C34F11.9a 1911   II: 5215623-5215831

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F11.9a.1 5215122 5225377 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49643   710   II: 5215122-5215831 Caenorhabditis elegans
Exon49647   168   II: 5216124-5216291 Caenorhabditis elegans
Exon49655   237   II: 5216340-5216576 Caenorhabditis elegans
Exon49663   176   II: 5217015-5217190 Caenorhabditis elegans
Exon49671   241   II: 5217245-5217485 Caenorhabditis elegans
Exon49679   122   II: 5217533-5217654 Caenorhabditis elegans
Exon49688   76   II: 5218966-5219041 Caenorhabditis elegans
Exon49702   96   II: 5223503-5223598 Caenorhabditis elegans
Exon49707   218   II: 5224137-5224354 Caenorhabditis elegans
Exon49711   149   II: 5224409-5224557 Caenorhabditis elegans
Exon49715   98   II: 5225098-5225195 Caenorhabditis elegans
Exon49720   130   II: 5225248-5225377 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F11.9a.1 5215122 5225377 -1

1 Sequence

Length
2421

1 Sequence Ontology Term

Identifier Name Description
transcript