WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16D1.2.1 Sequence Name  T16D1.2.1
Length (nt)  1418   Chromosome Location  II: 5236257-5238466
Chromosome . Primary Identifier  II Chromosome Location . Start  5236257
Chromosome Location . End  5238466 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16D1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004023 pho-4 T16D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16D1.2 T16D1.2 1359   II: 5236310-5236408

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16D1.2.1 5236257 5238466 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49709   152   II: 5236257-5236408 Caenorhabditis elegans
Exon49710   95   II: 5236453-5236547 Caenorhabditis elegans
Exon49711   52   II: 5236634-5236685 Caenorhabditis elegans
Exon49712   141   II: 5236740-5236880 Caenorhabditis elegans
Exon49713   167   II: 5237118-5237284 Caenorhabditis elegans
Exon49714   310   II: 5237379-5237688 Caenorhabditis elegans
Exon49715   83   II: 5237743-5237825 Caenorhabditis elegans
Exon49717   205   II: 5237963-5238167 Caenorhabditis elegans
Exon49718   105   II: 5238211-5238315 Caenorhabditis elegans
Exon49719   108   II: 5238359-5238466 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16D1.2.1 5236257 5238466 -1

1 Sequence

Length
1418

1 Sequence Ontology Term

Identifier Name Description
transcript