WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T16D1.2 Sequence Name  T16D1.2
Length (nt)  1359   Chromosome Location  II: 5236310-5236408
Chromosome . Primary Identifier  II Chromosome Location . Start  5236310
Chromosome Location . End  5236408
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16D1.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42330 PHO-4 51.4 452 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053408
WBRNAi00018764
WBRNAi00035606

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T16D1.2 5236310 5236408 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004023 pho-4 T16D1.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T16D1.2 5236310 5236408 -1
CDS:T16D1.2 5236453 5236547 -1
CDS:T16D1.2 5236634 5236685 -1
CDS:T16D1.2 5236740 5236880 -1
CDS:T16D1.2 5237118 5237284 -1
CDS:T16D1.2 5237379 5237688 -1
CDS:T16D1.2 5237743 5237825 -1
CDS:T16D1.2 5237963 5238167 -1
CDS:T16D1.2 5238211 5238315 -1
CDS:T16D1.2 5238359 5238460 -1

1 Sequence

Length
1359

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T16D1.2.1 T16D1.2.1 1418   II: 5236257-5238466