WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08B1.2a Sequence Name  F08B1.2a
Length (nt)  5040   Chromosome Location  II: 5312120-5312338
Chromosome . Primary Identifier  II Chromosome Location . Start  5312120
Chromosome Location . End  5312338
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B1.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01900 GCY-12, isoform a 190.0 1679 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001495
WBRNAi00043959
WBRNAi00043960
WBRNAi00012862

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08B1.2a 5312120 5312338 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001538 gcy-12 F08B1.2 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08B1.2a 5312120 5312338 1
CDS:F08B1.2a 5312390 5312702 1
CDS:F08B1.2a 5313113 5313263 1
CDS:F08B1.2a 5313330 5313637 1
CDS:F08B1.2a 5313683 5313838 1
CDS:F08B1.2a 5313887 5314080 1
CDS:F08B1.2a 5314125 5314278 1
CDS:F08B1.2a 5314701 5315061 1
CDS:F08B1.2a 5315108 5316833 1
CDS:F08B1.2a 5316879 5317011 1
CDS:F08B1.2a 5317469 5317715 1
CDS:F08B1.2a 5317770 5318114 1
CDS:F08B1.2a 5318189 5318390 1
CDS:F08B1.2a 5318444 5318649 1
CDS:F08B1.2a 5318706 5318902 1
CDS:F08B1.2a 5318956 5319083 1

1 Sequence

Length
5040

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08B1.2a.1 F08B1.2a.1 5648   II: 5312046-5319617