WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:EEED8.9 Sequence Name  EEED8.9
Length (nt)  1926   Chromosome Location  II: 5393467-5394187
Chromosome . Primary Identifier  II Chromosome Location . Start  5393467
Chromosome Location . End  5394187
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
EEED8.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28904 PINK-1 73.0 641 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00043705
WBRNAi00012708
WBRNAi00076265
WBRNAi00113607
WBRNAi00092288
WBRNAi00092294

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:EEED8.9 5393467 5394187 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017137 pink-1 EEED8.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:EEED8.9 5393467 5394187 -1
CDS:EEED8.9 5394235 5394633 -1
CDS:EEED8.9 5394681 5394910 -1
CDS:EEED8.9 5394959 5395116 -1
CDS:EEED8.9 5395161 5395398 -1
CDS:EEED8.9 5395450 5395581 -1
CDS:EEED8.9 5395632 5395679 -1

1 Sequence

Length
1926

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:EEED8.9.1 EEED8.9.1 2115   II: 5393293-5395694