WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56D1.4a Sequence Name  F56D1.4a
Length (nt)  4230   Chromosome Location  II: 5466474-5466547
Chromosome . Primary Identifier  II Chromosome Location . Start  5466474
Chromosome Location . End  5466547
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32051 CLR-1, isoform a 159.9 1409 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00068244
WBRNAi00025705
WBRNAi00000302
WBRNAi00048683
WBRNAi00008877
WBRNAi00027776
WBRNAi00112028

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56D1.4a 5466474 5466547 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000548 clr-1 F56D1.4 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56D1.4a 5466474 5466547 1
CDS:F56D1.4a 5466595 5466698 1
CDS:F56D1.4a 5467003 5467107 1
CDS:F56D1.4a 5467155 5467261 1
CDS:F56D1.4a 5467613 5467715 1
CDS:F56D1.4a 5467899 5468231 1
CDS:F56D1.4a 5468884 5468983 1
CDS:F56D1.4a 5469389 5469561 1
CDS:F56D1.4a 5469612 5469913 1
CDS:F56D1.4a 5469960 5470159 1
CDS:F56D1.4a 5470217 5470600 1
CDS:F56D1.4a 5470835 5471581 1
CDS:F56D1.4a 5471629 5471724 1
CDS:F56D1.4a 5471778 5471851 1
CDS:F56D1.4a 5471916 5472054 1
CDS:F56D1.4a 5472100 5472790 1
CDS:F56D1.4a 5472839 5473140 1
CDS:F56D1.4a 5473190 5473385 1

1 Sequence

Length
4230

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56D1.4a.1 F56D1.4a.1 4776   II: 5466359-5473816