WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D1.3.1 Sequence Name  F56D1.3.1
Length (nt)  609   Chromosome Location  II: 5474373-5475420
Chromosome . Primary Identifier  II Chromosome Location . Start  5474373
Chromosome Location . End  5475420 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018961 mrps-16 F56D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D1.3 F56D1.3 444   II: 5474408-5474554

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D1.3.1 5474373 5475420 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50324   182   II: 5474373-5474554 Caenorhabditis elegans
Exon50325   127   II: 5474616-5474742 Caenorhabditis elegans
Exon50326   131   II: 5474891-5475021 Caenorhabditis elegans
Exon50328   169   II: 5475252-5475420 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D1.3.1 5474373 5475420 1

1 Sequence

Length
609

1 Sequence Ontology Term

Identifier Name Description
transcript