WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56D1.3 Sequence Name  F56D1.3
Length (nt)  444   Chromosome Location  II: 5474408-5474554
Chromosome . Primary Identifier  II Chromosome Location . Start  5474408
Chromosome Location . End  5474554
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D1.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29407 MRPS-16 16.3 147 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000302
WBRNAi00048682
WBRNAi00071138
WBRNAi00008876
WBRNAi00025704

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56D1.3 5474408 5474554 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018961 mrps-16 F56D1.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56D1.3 5474408 5474554 1
CDS:F56D1.3 5474616 5474742 1
CDS:F56D1.3 5474891 5475021 1
CDS:F56D1.3 5475252 5475290 1

1 Sequence

Length
444

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56D1.3.1 F56D1.3.1 609   II: 5474373-5475420