WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G10.2.1 Sequence Name  C17G10.2.1
Length (nt)  1400   Chromosome Location  II: 5594714-5596456
Chromosome . Primary Identifier  II Chromosome Location . Start  5594714
Chromosome Location . End  5596456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015916 ttc-4 C17G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G10.2 C17G10.2 1260   II: 5594736-5594843

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G10.2.1 5594714 5596456 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50834   130   II: 5594714-5594843 Caenorhabditis elegans
Exon50835   129   II: 5594897-5595025 Caenorhabditis elegans
Exon50836   124   II: 5595073-5595196 Caenorhabditis elegans
Exon50837   258   II: 5595251-5595508 Caenorhabditis elegans
Exon50838   257   II: 5595564-5595820 Caenorhabditis elegans
Exon50839   309   II: 5595874-5596182 Caenorhabditis elegans
Exon50840   193   II: 5596264-5596456 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G10.2.1 5594714 5596456 1

1 Sequence

Length
1400

1 Sequence Ontology Term

Identifier Name Description
transcript