WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59E12.5a.1 Sequence Name  F59E12.5a.1
Length (nt)  1828   Chromosome Location  II: 5622895-5624959
Chromosome . Primary Identifier  II Chromosome Location . Start  5622895
Chromosome Location . End  5624959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59E12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019121 npl-4.2 F59E12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59E12.5a F59E12.5a 1584   II: 5622897-5623040

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59E12.5a.1 5622895 5624959 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50888   146   II: 5622895-5623040 Caenorhabditis elegans
Exon50889   366   II: 5623092-5623457 Caenorhabditis elegans
Exon50891   192   II: 5623520-5623711 Caenorhabditis elegans
Exon50893   733   II: 5623759-5624491 Caenorhabditis elegans
Exon50897   391   II: 5624569-5624959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59E12.5a.1 5622895 5624959 1

1 Sequence

Length
1828

1 Sequence Ontology Term

Identifier Name Description
transcript