WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59E12.5a Sequence Name  F59E12.5a
Length (nt)  1584   Chromosome Location  II: 5622897-5623040
Chromosome . Primary Identifier  II Chromosome Location . Start  5622897
Chromosome Location . End  5623040
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59E12.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11526 NPL-4.2, isoform a 59.4 527 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00070453
WBRNAi00049209
WBRNAi00024788
WBRNAi00025779
WBRNAi00025780
WBRNAi00016128
WBRNAi00093482
WBRNAi00094124
WBRNAi00093474
WBRNAi00076511
WBRNAi00076510
WBRNAi00071143
WBRNAi00071142
WBRNAi00093498
WBRNAi00093490
WBRNAi00113071
WBRNAi00113300
WBRNAi00008137
WBRNAi00033213
WBRNAi00008511
WBRNAi00078140
WBRNAi00078139
WBRNAi00088785
WBRNAi00088678
WBRNAi00070450
WBRNAi00070452
WBRNAi00070451

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F59E12.5a 5622897 5623040 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019121 npl-4.2 F59E12.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F59E12.5a 5622897 5623040 1
CDS:F59E12.5a 5623092 5623457 1
CDS:F59E12.5a 5623520 5623711 1
CDS:F59E12.5a 5623759 5624491 1
CDS:F59E12.5a 5624569 5624717 1

1 Sequence

Length
1584

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59E12.5a.1 F59E12.5a.1 1828   II: 5622895-5624959