WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59E12.2.1 Sequence Name  F59E12.2.1
Length (nt)  2342   Chromosome Location  II: 5649748-5654422
Chromosome . Primary Identifier  II Chromosome Location . Start  5649748
Chromosome Location . End  5654422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59E12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006988 zyg-1 F59E12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59E12.2 F59E12.2 2121   II: 5649774-5649806

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59E12.2.1 5649748 5654422 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51022   59   II: 5649748-5649806 Caenorhabditis elegans
Exon51023   93   II: 5649862-5649954 Caenorhabditis elegans
Exon51024   816   II: 5650036-5650851 Caenorhabditis elegans
Exon51025   368   II: 5650935-5651302 Caenorhabditis elegans
Exon51028   375   II: 5653325-5653699 Caenorhabditis elegans
Exon51029   229   II: 5653744-5653972 Caenorhabditis elegans
Exon51030   402   II: 5654021-5654422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59E12.2.1 5649748 5654422 1

1 Sequence

Length
2342

1 Sequence Ontology Term

Identifier Name Description
transcript