WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18A3.5a Sequence Name  C18A3.5a
Length (nt)  1227   Chromosome Location  II: 5712840-5713124
Chromosome . Primary Identifier  II Chromosome Location . Start  5712840
Chromosome Location . End  5713124
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18A3.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27708 TIAR-1, isoform a 45.2 408 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00073935
WBRNAi00073936
WBRNAi00073937
WBRNAi00073938
WBRNAi00073939
WBRNAi00073940
WBRNAi00073941
WBRNAi00000926
WBRNAi00072349
WBRNAi00040884
WBRNAi00040885
WBRNAi00010961
WBRNAi00076149
WBRNAi00112356
WBRNAi00029047
WBRNAi00007938
WBRNAi00112352
WBRNAi00098566

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18A3.5a 5712840 5713124 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015943 tiar-1 C18A3.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18A3.5a 5712840 5713124 -1
CDS:C18A3.5a 5713171 5713355 -1
CDS:C18A3.5a 5713434 5713854 -1
CDS:C18A3.5a 5714062 5714157 -1
CDS:C18A3.5a 5714494 5714590 -1
CDS:C18A3.5a 5714663 5714805 -1

1 Sequence

Length
1227

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18A3.5a.1 C18A3.5a.1 1734   II: 5712351-5714823