WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K05F1.6a Sequence Name  K05F1.6a
Length (nt)  2571   Chromosome Location  II: 5782948-5783195
Chromosome . Primary Identifier  II Chromosome Location . Start  5782948
Chromosome Location . End  5783195
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05F1.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37028 K05F1.6, isoform a 96.2 856 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00001154
WBRNAi00049993
WBRNAi00016631
WBRNAi00033991
WBRNAi00023264
WBRNAi00023522
WBRNAi00023775
WBRNAi00024062

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K05F1.6a 5782948 5783195 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019408 K05F1.6 K05F1.6 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:K05F1.6a 5782948 5783195 1
CDS:K05F1.6a 5783702 5783923 1
CDS:K05F1.6a 5784061 5784331 1
CDS:K05F1.6a 5784941 5785075 1
CDS:K05F1.6a 5785119 5785250 1
CDS:K05F1.6a 5785303 5785433 1
CDS:K05F1.6a 5785482 5785651 1
CDS:K05F1.6a 5785698 5785807 1
CDS:K05F1.6a 5785854 5786081 1
CDS:K05F1.6a 5786187 5786437 1
CDS:K05F1.6a 5786486 5786855 1
CDS:K05F1.6a 5786907 5787037 1
CDS:K05F1.6a 5787084 5787162 1
CDS:K05F1.6a 5787214 5787306 1

1 Sequence

Length
2571

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K05F1.6a.1 K05F1.6a.1 3301   II: 5782531-5787668
Transcript:K05F1.6a.2 K05F1.6a.2 2939   II: 5782942-5787668