WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H41C03.3.1 Sequence Name  H41C03.3.1
Length (nt)  1719   Chromosome Location  II: 5845777-5850308
Chromosome . Primary Identifier  II Chromosome Location . Start  5845777
Chromosome Location . End  5850308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H41C03.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019270 H41C03.3 H41C03.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H41C03.3 H41C03.3 1521   II: 5847746-5847887

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.1 5845777 5850308 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51623   105   II: 5845777-5845881 Caenorhabditis elegans
Exon51627   142   II: 5847746-5847887 Caenorhabditis elegans
Exon51631   140   II: 5847936-5848075 Caenorhabditis elegans
Exon51635   69   II: 5848393-5848461 Caenorhabditis elegans
Exon51639   307   II: 5848514-5848820 Caenorhabditis elegans
Exon51643   261   II: 5849121-5849381 Caenorhabditis elegans
Exon51647   143   II: 5849427-5849569 Caenorhabditis elegans
Exon51651   119   II: 5849619-5849737 Caenorhabditis elegans
Exon51655   127   II: 5849788-5849914 Caenorhabditis elegans
Exon51659   120   II: 5849958-5850077 Caenorhabditis elegans
Exon51665   186   II: 5850123-5850308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.1 5845777 5850308 1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
transcript