WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H41C03.3.2 Sequence Name  H41C03.3.2
Length (nt)  1683   Chromosome Location  II: 5846633-5850302
Chromosome . Primary Identifier  II Chromosome Location . Start  5846633
Chromosome Location . End  5850302 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H41C03.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019270 H41C03.3 H41C03.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H41C03.3 H41C03.3 1521   II: 5847746-5847887

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.2 5846633 5850302 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51626   75   II: 5846633-5846707 Caenorhabditis elegans
Exon51628   142   II: 5847746-5847887 Caenorhabditis elegans
Exon51632   140   II: 5847936-5848075 Caenorhabditis elegans
Exon51636   69   II: 5848393-5848461 Caenorhabditis elegans
Exon51640   307   II: 5848514-5848820 Caenorhabditis elegans
Exon51644   261   II: 5849121-5849381 Caenorhabditis elegans
Exon51648   143   II: 5849427-5849569 Caenorhabditis elegans
Exon51652   119   II: 5849619-5849737 Caenorhabditis elegans
Exon51656   127   II: 5849788-5849914 Caenorhabditis elegans
Exon51660   120   II: 5849958-5850077 Caenorhabditis elegans
Exon51663   180   II: 5850123-5850302 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.2 5846633 5850302 1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
transcript