WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H41C03.3.3 Sequence Name  H41C03.3.3
Length (nt)  1615   Chromosome Location  II: 5847746-5850309
Chromosome . Primary Identifier  II Chromosome Location . Start  5847746
Chromosome Location . End  5850309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H41C03.3.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019270 H41C03.3 H41C03.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H41C03.3 H41C03.3 1521   II: 5847746-5847887

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.3 5847746 5850309 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51630   142   II: 5847746-5847887 Caenorhabditis elegans
Exon51633   140   II: 5847936-5848075 Caenorhabditis elegans
Exon51637   69   II: 5848393-5848461 Caenorhabditis elegans
Exon51641   307   II: 5848514-5848820 Caenorhabditis elegans
Exon51645   261   II: 5849121-5849381 Caenorhabditis elegans
Exon51649   143   II: 5849427-5849569 Caenorhabditis elegans
Exon51653   119   II: 5849619-5849737 Caenorhabditis elegans
Exon51657   127   II: 5849788-5849914 Caenorhabditis elegans
Exon51661   120   II: 5849958-5850077 Caenorhabditis elegans
Exon51666   187   II: 5850123-5850309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.3 5847746 5850309 1

1 Sequence

Length
1615

1 Sequence Ontology Term

Identifier Name Description
transcript