WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59G1.3.1 Sequence Name  F59G1.3.1
Length (nt)  2981   Chromosome Location  II: 5907816-5911219
Chromosome . Primary Identifier  II Chromosome Location . Start  5907816
Chromosome Location . End  5911219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59G1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006933 vps-35 F59G1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59G1.3 F59G1.3 2466   II: 5907820-5907924

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59G1.3.1 5907816 5911219 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51773   109   II: 5907816-5907924 Caenorhabditis elegans
Exon51774   91   II: 5908000-5908090 Caenorhabditis elegans
Exon51775   127   II: 5908135-5908261 Caenorhabditis elegans
Exon51776   888   II: 5908349-5909236 Caenorhabditis elegans
Exon51777   364   II: 5909309-5909672 Caenorhabditis elegans
Exon51778   237   II: 5909720-5909956 Caenorhabditis elegans
Exon51779   453   II: 5910002-5910454 Caenorhabditis elegans
Exon51780   712   II: 5910508-5911219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59G1.3.1 5907816 5911219 1

1 Sequence

Length
2981

1 Sequence Ontology Term

Identifier Name Description
transcript