WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59G1.3 Sequence Name  F59G1.3
Length (nt)  2466   Chromosome Location  II: 5907820-5907924
Chromosome . Primary Identifier  II Chromosome Location . Start  5907820
Chromosome Location . End  5907924
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59G1.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39945 VPS-35 93.8 821 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00107887
WBRNAi00107888
WBRNAi00107889
WBRNAi00101730
WBRNAi00101729
WBRNAi00101732
WBRNAi00101863
WBRNAi00101733
WBRNAi00101734
WBRNAi00101743
WBRNAi00049234
WBRNAi00065341
WBRNAi00101329
WBRNAi00071776
WBRNAi00076515
WBRNAi00071148
WBRNAi00080640
WBRNAi00101731
WBRNAi00101874
WBRNAi00008913
WBRNAi00080477
WBRNAi00099088
WBRNAi00099092

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F59G1.3 5907820 5907924 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006933 vps-35 F59G1.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F59G1.3 5907820 5907924 1
CDS:F59G1.3 5908000 5908090 1
CDS:F59G1.3 5908135 5908261 1
CDS:F59G1.3 5908349 5909236 1
CDS:F59G1.3 5909309 5909672 1
CDS:F59G1.3 5909720 5909956 1
CDS:F59G1.3 5910002 5910454 1
CDS:F59G1.3 5910508 5910708 1

1 Sequence

Length
2466

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59G1.3.1 F59G1.3.1 2981   II: 5907816-5911219