WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28B12.3 Sequence Name  F28B12.3
Length (nt)  1833   Chromosome Location  II: 5921972-5922454
Chromosome . Primary Identifier  II Chromosome Location . Start  5921972
Chromosome Location . End  5922454
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B12.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02704 VRK-1 67.3 610 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00070438
WBRNAi00065796
WBRNAi00081724
WBRNAi00082714
WBRNAi00065795
WBRNAi00108290
WBRNAi00065794
WBRNAi00025286
WBRNAi00070436
WBRNAi00008707
WBRNAi00070435
WBRNAi00065797
WBRNAi00065798
WBRNAi00070437
WBRNAi00031511
WBRNAi00007985
WBRNAi00045782
WBRNAi00082388

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28B12.3 5921972 5922454 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017895 vrk-1 F28B12.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28B12.3 5921972 5922454 1
CDS:F28B12.3 5922502 5922765 1
CDS:F28B12.3 5922813 5922899 1
CDS:F28B12.3 5923055 5923853 1
CDS:F28B12.3 5923908 5924023 1
CDS:F28B12.3 5924375 5924458 1

1 Sequence

Length
1833

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28B12.3.1 F28B12.3.1 2218   II: 5921967-5924838
Transcript:F28B12.3.2 F28B12.3.2 2213   II: 5921971-5924837